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RPKM, FPKM and TPM, clearly explained | RNA-Seq Blog

RPKM, FPKM and TPM, clearly explained

Posted by: RNA-Seq Blog in Data Normalization, Expression and Quantification, Statisitcal Analysis July 22, 2015 112,665 Views

from StatQuest

It used to be when you did RNA-seq, you reported your results in RPKM (Reads Per Kilobase Million) or FPKM (Fragments Per Kilobase Million). However, TPM (Transcripts Per Kilobase Million) is now becoming quite popular. Since there seems to be a lot of confusion about these terms, I thought I’d use a StatQuest to clear everything up.
sequencing  ngs  terminology  bioinformatics  explained  newbie 
june 2017 by kme

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